Package | Description |
---|---|
de.mpc.prolic.comparison | |
de.mpc.prolic.misc | |
de.mpc.prolic.model |
Modifier and Type | Method and Description |
---|---|
static boolean |
PeptideBasedComparison.bilateralCompPeptSeq(Protein aProt,
Protein anOtherProt,
java.util.ArrayList<Enzyme> enzymes)
Performs a peptide based comparison of two proteins obtained from different protein list.
|
static boolean |
PeptideBasedComparison.bilateralCompPeptSeqMod(Protein aProt,
Protein anOtherProt,
java.util.ArrayList<Enzyme> enzymes)
Performs a peptide based comparison of two proteins obtained from different protein lists.
|
Modifier and Type | Method and Description |
---|---|
static Enzyme |
Tools.createEnzyme(java.lang.String enzymeFeatures)
This method creates an instance of Enzyme from the information specified in the Enzymes section of the configuration file.
|
Modifier and Type | Method and Description |
---|---|
java.util.ArrayList<Enzyme> |
Digest.getEnzymes()
Setter and Getter
|
Modifier and Type | Method and Description |
---|---|
void |
Digest.addEnzyme(Enzyme e) |