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Selected Publications

 

Molitor, B., Stassen, M., Modi, A., El-Mashtoly, S.F., Laurich, C., Lubitz, W., Dawson, J.H., Rother, M., & Frankenberg-Dinkel, N. (2013) A heme-based redox sensor in the methanogenic archaeon Methanosarcina acetivorans. J. Biol. Chem. In press PubMed
Salewski, J., Velazquez, F., Kaminski, S., von Stetten, D., Keidel, A., Rippers, Y., Michael, N., Scheerer, P., Piwowarski, P., Bartl, F., Frankenberg-Dinkel, N., Ringsdorf, S., Gärtner, W., Lamparter, T., Mroginski, M.A. & Hildebrandt, P. (2013) The structure of the biliverdin cofactor in the Pfr state of bathy and prototypical phytochromes. J. Biol. Chem. In press PubMed
Shah, R., Schwach, J., Frankenberg-Dinkel, N. & Gärtner, W. (2012) Complex formation between heme oxygenase and phytochrome during biosynthesis in Pseudomonas syringae pv tomato. Photochem. Photobiol. Sci. 11, 1026-1031. PubMed
Wallner, T., Hagiwara, Y., Sobotka, R., Bernát, G., Reijerse, E.J., Frankenberg-  Dinkel, N. & Wilde, A. (2012) Inactivation of the conserved open reading frame ycf34 of Synechocystis sp. PCC 6803 interferes with the photosynthetic electron transport chain. Biochim. Biophys. Acta-Bioenergetics im Druck PubMed
Gisk, B., Wiethaus, J., Aras, M. & Frankenberg-Dinkel, N. (2012) Variable composition of heme oxygenases with different regiospecificities in Pseudomonas species. Arch. Microbiol. 194, 597-606. PubMed
Gisk, B., Molitor, B., Frankenberg-Dinkel, N. & Kötting, C. (2012) Heme oxygenases from Arabidopsis thaliana reveal different mechanisms of carbon monoxide binding. Spectrochim. Acta A: Mol. Biomol. Spectroscopy 88, 235-240. PubMed
Busch, A.W.U, Reijerse, E.J., Lubitz, W, Frankenberg-Dinkel, N.*& Hofmann, E.* (2011) Structural and mechanistic insights into the two-electron reduction of bilins Biochem. J. 439, 264-257.
*corresponding author
PubMed
Barkovits, K., Schubert, B., Heine, S., Scheer, M. & Frankenberg-Dinkel, N. (2011) Function of the bacteriophytochrome BphP in the RpoS/Las-Quorum sensing network of Pseudomonas aeruginosa. Microbiology 157, 1651-64. PubMed
Busch A.W., Reijerse, E.J., Lubitz, W., Hofmann, E., Frankenberg-Dinkel, N. (2011) Radical mechanism of cyanophage phycoerythrobilin synthase (PebS) Biochem. J. 14;433(3):469-76 PubMed
Gisk B, Brégier F, Krüger RA, Bröring M, Frankenberg-Dinkel N. (2010) Enzymatic Ring Opening of an Iron Corrole by Plant-Type Heme Oxygenases: Unexpected Substrate and Protein Selectivities. Biochemistry 30;49(47):10042-4. PubMed
Wiethaus J., Busch A.W., Dammeyer T., Frankenberg-Dinkel N. (2010)  Phycobiliproteins in Prochlorococcus marinus: Biosynthesis of pigments and their assembly into proteins. European Journal of Cell Biology 89 1005–1010 PubMed
Wiethaus, J., Busch, A.W., Kock, K., Leichert, L.I., Herrmann, C. & Frankenberg-Dinkel N.(2010) CpeS is a lyase specific for attachment of 3Z-PEB to Cys82 of b-phycoerythrin from Prochlorococcus marinus MED4.  J. Biol. Chem. 26;285(48):37561-9. PubMed
Gisk, B., Yasui, Y., Kohchi, T. & Frankenberg-Dinkel, N. (2010) Characterization of the heme oxygenase protein family in Arabidopsis thaliana reveals a diversity of functions. Biochem J. 425, 425-434.

PubMed
Michel, K.-P.., Schröder, A.-K., Zimmermann, M.,Brandt, S.,Pistorius, E.K., Frankenberg-Dinkel, N..& Staiger, D. (2009) The hybrid histidine kinase Slr 1759 of the cyanobacterium Synechocystis sp. PCC 6803 contains FAD as a cofactor at its PAS domain. Arch. Microbiol. 191, 553-559

PubMed
Brandt, S., von Stetten, D.,  Günther, M., Hildebrandt, P. & Frankenberg-Dinkel, N. (2008) The fungal phytochrome FphA from Aspergillus nidulans. J. Biol. Chem. 283, 34605-34614.

PubMed
Dammeyer, T. & Frankenberg-Dinkel, N. (2008) Function and distribution of bilin biosynthesis enzymes in photosynthetic organisms. Photochem Photobiol Sci. 7,  71121-71130.

PubMed
Dammeyer, T., Hofmann, E. & Frankenberg-Dinkel, N. (2008)  Phycoerythrobilin synthase (PebS) of a marine virus- Crystal structures of the biliverdin-complex and the substrate free form. J. Biol. Chem. 283, 27547-27554

PubMed
Dammeyer, T., Bagby, S.C., Sullivan, M.B., Chisholm, S.W. & Frankenberg-Dinkel, N. (2008) Efficient Phage-Mediated Pigment Biosynthesis in Oceanic Cyanobacteria Curr. Biol. 18, 442-448

PubMed
Barkovits, K., Harms, A., Benkartek, C., Smart, J. L. & Frankenberg- Dinkel, N. (2008) Expression of the Pseudomonas aeruginosa phytochrome operon is dependent on the alternative sigma factor RpoS. FEMS Microbiol. Lett. 280, 160-168.

PubMed
Brandt, S. & Frankenberg-Dinkel, N. (2007) Phytochrome: Bakterien sehen Rot. Biospektrum 4, 358-360.

Dammeyer, T., Michaelsen, K. & Frankenberg-Dinkel, N. (2007) Biosynthesis of open chain tetrapyrroles in Prochlorococcus marinus. FEMS Microbiol Lett., 271, 251-257.

PubMed
Alvey, R. M., Bezy, R. P., Frankenberg-Dinkel, N. & Kehoe, D.M. (2007) A light-regulated OmpR-class promoter element coordinates light harvesting protein and chromophore biosynthetic enzyme gene expression Mol. Microbiol. 64, 319-332.

PubMed
Gacond, S., Frère, F., Nentwich, M., Faurite, J.-P., Frankenberg-Dinkel, N. & Neier, R. (2007) Synthesis of Bisubstrate Inhibitors of Porphobilinogen Synthase from Pseudomonas aeruginosa. Chem. Biodiv.,4, 189-202.

PubMed
Dammeyer, T. & Frankenberg-Dinkel, N.(2006) Insights into phycoerythrobilin biosynthesis point towards for metabolic channeling. J. Biol. Chem. 281, 27081-27089

PubMed
Frere, F., Nentwich, M., Gacond, S., Heinz, D.W., Neier, R. & Frankenberg-Dinkel, N. (2006) Probing the active site of Pseudomonas aeruginosa porphobilinogen synthase using newly developed inhibitors Biochemistry, 45, 8243 -8253.

PubMed
Blumenstein, A., Vienken, K., Tasler, R., Purschwitz, J., Veith, D., Frankenberg-Dinkel, N. & Fischer, R. (2005)The Aspergillus nidulans phytochrome FphA represses sexual development in red light. Curr. Biol. , 15, 1833-1838.

PubMed
Steglich, C., Frankenberg-Dinkel, N., Penno, S. & Hess, W. R. (2005) An unusual green light-absorbing phycoerythrin evolved in the high-light-adapted marine cyanobacterium Prochlorococcus sp. MED4. Environ. Microbiol 7, 1611-1618.

PubMed
Tasler, R., Moises, T. & Frankenberg-Dinkel, N. (2005) Biochemical and spectroscopic characterization of the bacterial phytochrome of Pseudomonas aeruginosa. FEBS J. 272, 1927-1936 .

PubMed
Wegele, R., Tasler, R., Zeng, Y., Rivera, M. & Frankenberg-Dinkel, N. (2004) The hemeoxygenase(s)-phytochrome system of Pseudomonas aeruginosa. J. Biol. Chem. 279, 45791-45802.

PubMed
Frankenberg, N. & Lagarias, J. C. (2003) Phycocyanobilin:ferredoxin oxidoreductase (PcyA) of Anabaena sp. PCC 7120. Biochemical and spectroscopic characterization. J. Biol. Chem. 278, 9219-9226.

PubMed
Frère, F., Schubert, W. D., Stauffer, F., Frankenberg, N., Neier, R., Jahn, D. & Heinz, D.W. (2002) Structure of porphobilinogen synthase from Pseudomonas aeruginosa in complex with 5-fluorolevulinic acid suggests a double Schiff base mechanism. J. Mol. Biol. 320, 237-247.

PubMed
Kohchi, T., Mukougawa, K., Frankenberg, N., Masuda, M., Yokota, A. & Lagarias, J.C. (2001) The Arabidopsis HY2 gene encodes a ferredoxin-dependent phytochromobilin synthase for phytochrome chromophore biosynthesis. Plant Cell Physiol . 42 (supplement: s 56)

PubMed
Frankenberg, N., Mukougawa, K., Kohchi, T. & Lagarias, J.C. (2001) Functional genomic characterization of the HY2 family of ferredoxin-dependent bilin reductases from oxygenic photosynthetic bacteria. Plant Cell 13, 965-978.

PubMed
Kohchi, T., Mukougawa, K., Frankenberg, N., Masuda, M., Yokota, A. & Lagarias, J.C. (2001) The Arabidopsis HY2 gene, necessary for phytochrome chromophore biosynthesis, encodes phytochromobilin synthase. Plant Cell 13, 425-436. PubMed