Package | Description |
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de.mpc.prolic.misc |
Modifier and Type | Method and Description |
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static BiomoleculeList |
IO.readProLiCformatedProteinFile(java.io.File file_,
java.lang.String delimiter_,
java.lang.String origin_,
boolean considerProteinNames,
boolean considerGeneNames,
org.apache.logging.log4j.Logger log4j,
java.lang.Boolean inconsistenciesExist)
Reads protein data (including the related peptide information) from a file in the ProLiC format and builds the protein instances.
|
Modifier and Type | Method and Description |
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static int |
Tools.calcMaxNumberPeptids(BiomoleculeList aBL)
Calculates the maximum number of peptides that are assigned to a protein within the given BiomoleculeList.
|